[Beowulf] OT: informatics software for linux clusters

Michael Will mwill at penguincomputing.com
Mon May 15 12:09:07 PDT 2006

Now if you where to port it to MPI, what speedup would you expect? 

-----Original Message-----
From: beowulf-bounces at beowulf.org [mailto:beowulf-bounces at beowulf.org]
On Behalf Of Joe Landman
Sent: Monday, May 15, 2006 11:53 AM
To: beowulf
Subject: [Beowulf] OT: informatics software for linux clusters

(sorry for spamming)

   Scalable Informatics has released Scalable HMMer, an optimized
version of HMMer 2.3.2 that is 1.6-2.5x faster per node on benchmark
tests run on Opteron systems.  HMMer uses PVM for inter-node

   Please see http://www.scalableinformatics.com for details on where to
download it, and how to use the yum repository.

Joseph Landman, Ph.D
Founder and CEO
Scalable Informatics LLC,
email: landman at scalableinformatics.com
web  : http://www.scalableinformatics.com
phone: +1 734 786 8423
fax  : +1 734 786 8452
cell : +1 734 612 4615
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