[Beowulf] RE: OT: Announcing MPI-HMMER
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Joe Landman landman at scalableinformatics.comWed Jan 3 17:48:20 PST 2007
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Chris Samuel wrote: > On Thursday 04 January 2007 04:27, David Mathog wrote: > >> Joe and I aparently exist in parallel software universes ;-). > > Being MPI means it can take advantage of high speed interconnects (e.g. > building it with MPICH-GM to use native Myrinet). Of course whether that > would benefit HMMER is something I don't know! It does. The code does very nicely with low latency (and low OS jitter). XD1's, while discontinued, are sweet boxes. -- Joseph Landman, Ph.D Founder and CEO Scalable Informatics LLC, email: landman at scalableinformatics.com web : http://www.scalableinformatics.com phone: +1 734 786 8423 fax : +1 734 786 8452 cell : +1 734 612 4615
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