Bioinformatics/Beowulf applications
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Borries Demeler demeler at bioc09.v19.uthscsa.eduFri Mar 23 07:03:09 PST 2001
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Greetings, I have been put in charge of developing our new bioinformatics core facility. Having used Beowulf computers in my research for simple Monte Carlo (hydrodynamic modeling of biological macromolecules), I am planning to expand onto other areas of Beowulf implementations. To get started, I am looking for links (perhaps a well organized web site?) and contacts to groups that have implemented Beowulfs in bioinformatic applications. In particular I am looking for Beowulf enabled software/applications in: * molecular modeling/statistical mechanics * structure solutions for X-ray crystallography data * structure solutions for NMR data * structure prediction software * sequence analysis/genomics * machine vision/pattern recognition/neural networks (self-organizing maps) * proteomics others? If you know of a website with relevant links or are working on applications that may be potentially useful for other researchers, I would be grateful for some feedback. Thank you very much, -Borries ******************************************************************************* * Borries Demeler, Ph.D. * * The University of Texas Health Science Center at San Antonio * * Dept. of Biochemistry, 7703 Floyd Curl Drive, San Antonio, Texas 78229-3900 * * Voice: 210-567-6592, Fax: 210-567-4575, Email: demeler at biochem.uthscsa.edu * *******************************************************************************
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